Protein ZmMADS1
ZmMADS1 is a protein in the MADS family.
Information
TF Name: ZmMADS1
Species: Maize
TF Family: MADS
Gene Name(Synonym): MADS1
Uniprot ID: K7VM30

Protein ZmMADS1

ZmMADS1 is a protein in the MADS family.

Overview of domains present in v5 transcripts
PF00319PF01486
Zm00001eb403750_T003
Zm00001eb403750_T001
Zm00001eb403750_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d048474DAPseq no logo sequence fimo position
Zm00001d048474DAPseq no logo sequence fimo position
Zm00001d048474ChIPseq no logo sequence fimo position
Zm00001d048474PChIPseq no logo sequence fimo position

Interactions where ZmMADS1 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMADS1 is the target  
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There are 62 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb403750_T003 from maize genome v5

Amino Acid Sequence
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MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKCKKQPPVPMASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKCKKQPPVPMASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKCKKQPPVPMASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKCKKQPPVPMASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKCKKQPPVPMASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKCKKQPPVPMASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00319
PF01486
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Nucleotide Sequence
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CACCCCCGGCCACCCCTGACCCCTC...

GRMZM2G171365_T01 from maize genome v3


Related TFome: pUT1761

Amino Acid Sequence
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MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKCKKQPPVPMASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

Nucleotide Sequence
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CACCCCCGGCCACACCTGACCCCTC...

GRMZM2G171365_T02 from maize genome v3

Amino Acid Sequence
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MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRQLPSYQILISLCTCPRTNLR

Nucleotide Sequence
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CACCCCCGGCCACACCTGACCCCTC...

GRMZM2G171365_T03 from maize genome v3

Amino Acid Sequence
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MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKVMVPKHLTAMRTTRRCTL

Nucleotide Sequence
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CACCCCCGGCCACACCTGACCCCTC...

GRMZM2G171365_T04 from maize genome v3

Amino Acid Sequence
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MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKCKKQPPVPMASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

Nucleotide Sequence
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CGGCCAAAAACCCTACGCGGCCCCT...

Zm00001d048474_T001 from maize genome v4

Amino Acid Sequence
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MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKCKKQPPVPMASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

Nucleotide Sequence
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GTCCAGCACCGCCCGCAGCCGGAAA...

Zm00001d048474_T002 from maize genome v4

Amino Acid Sequence
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MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIEVTWKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLRKSNEDLREKCKKQPPVPM
ASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

Nucleotide Sequence
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GTCCAGCACCGCCCGCAGCCGGAAA...

Zm00001d048474_T003 from maize genome v4

Amino Acid Sequence
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MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRQLPSYQILISLSHDFISSDLAWQTELLEEQVRKLKQKEMSLRKSNEDLREKC
KKQPPVPMASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

Nucleotide Sequence
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GTCCAGCACCGCCCGCAGCCGGAAA...

Zm00001d048474_T004 from maize genome v4

Amino Acid Sequence
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MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRQLPSYQILISLCTCPRTNLR

Nucleotide Sequence
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AACCAACGCCCTTTCCCTTGCCATT...

Zm00001eb403750_T001 from maize genome v5

Amino Acid Sequence
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MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKCKKQPPVPMASAPPRAPAVDNVEDGHREPKDDGMDVETELYIGLPGRDYRSSKDKAAVAVRSG

Nucleotide Sequence
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CACCCCCGGCCACCCCTGACCCCTC...

Zm00001eb403750_T002 from maize genome v5

Amino Acid Sequence
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MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASGSAQKTIERYRTYTKDNVSNK
TVQQDIERVKADADGLSKRLEALEAYKRKLLGERLEDCSIEELHSLEVKLEKSLHCIRGRKTELLEEQVRKLKQKEMSLR
KSNEDLREKVMVPKHLTAMRTTRRCTL

Nucleotide Sequence
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CACCCCCGGCCACCCCTGACCCCTC...


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